#
# PGTwoIII Makefile
#

CC		= g++
WARNINGS	= -Wall -ansi
DEBUG		= -ggdb

#OPTIMIZE       = -O3  -mcpu=pentium2 -mmmx -momit-leaf-frame-pointer -fomit-frame-pointer -ftracer -malign-double
#OPTIMIZE       = -O3 -march=pentium3 -msse -momit-leaf-frame-pointer -fomit-frame-pointer -ftracer -fprefetch-loop-arrays -malign-double
OPTIMIZE       = -O3 -march=pentium4 -msse -momit-leaf-frame-pointer -fomit-frame-pointer -fprefetch-loop-arrays -malign-double
# Athlon-XP
#OPTIMIZE        = -O3 -march=athlon-xp -msse -mmmx -m3dnow -mfpmath=sse -momit-leaf-frame-pointer -fomit-frame-pointer -ftracer -fprefetch-loop-arrays -malign-double
#float optimized
#OPTIMIZE       = -O3 -march=athlon-xp  -momit-leaf-frame-pointer -fomit-frame-pointer -ftracer -fprefetch-loop-arrays -malign-double
#OPTIMIZE       = -m128bit-long-double -msse
PROFILE         = -pg
#CFLAGS         = $(WARNINGS)
CFLAGS          = $(WARNINGS) $(OPTIMIZE)
#CFLAGS         = $(WARNINGS) $(DEBUG)
#CFLAGS         = $(WARNINGS) $(PROFILE)
SHELL		= /bin/sh

IMPORTANTFILES	= Makefile PGTwoIII_PerProtein.cpp  PGTwoIII_PerProtein.h  PGTwoIII.cpp  PGTwoIII_PD.cpp  PGTwoIII_PD.h


all:	clean PGTwoIII

PGTwoIII: PGTwoIII_PerProtein.o PGTwoIII_PD.o PGTwoIII.o
	$(CC) $(CFLAGS) -o $@ $^



clean:
	rm -f *.o  PGTwoIII

backup:
	tar jvcf ./backup_PGTwoIII-`date +'%Y-%m-%d_%H.%M'`.tar.bz2 $(IMPORTANTFILES)




# Dependency's




PGTwoIII_PerProtein.o: PGTwoIII_PerProtein.cpp
	$(CC) $(CFLAGS) -c $^
	
PGTwoIII_PD.o: PGTwoIII_PD.cpp
	$(CC) $(CFLAGS) -c $^

PGTwoIII.o: PGTwoIII.cpp
	$(CC) $(CFLAGS) -c $^